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WaferMapper: Automated image acquisition software

thalamocortical relay cells

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Accessing the Data

Description of the dataset

Guide to structures in the dLGN dataset

Project Registry

The dLGN dataset was acquired with WaferMapper, a Matlab software package that automates the acquisition of large EM volumes on Zeiss Merlin and Sigma scanning electron microscopes.

WaferMapper PUBLICATION
Hayworth KJ*, Morgan JL*, Schalek R, Berger DR, Hildebrand DG, Lichtman JW. (2014) Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits. Frontiers in Neural Circuits. 8.68.

WaferMapper DOWNLOAD
WaferMapper 1.88